Browsing Posts published in November, 2011

    The reasons that such different clinical outcomes (Dent 2 and Lowe’s syndrome) can stem from mutations in OCRL1 remain to be defined, with two likely hypotheses being that compensatory genes (e.g., INPP5B, encoding inositol polyphosphate 5-phosphatase) or alternative initiation codons in OCRL downstream of nonsense mutations might be activated in a tissue-specific way in patients with Dent 2.51 However, the overlap of the renal phenotypes caused by OCRL and CLCN5 mutations allows the prediction that these two genes participate in a common molecular pathway that controls endosomal trafficking of the multiligand receptor megalin.

    Summary

    It is reasonable to hope that our basic knowledge of membrane trafficking will continue to provide insights into the pathogenesis of mendelian diseases and that studies of these diseases will continue to enhance our understanding of the membrane-trafficking system. In particular, it will be of great interest in this context to learn how to place the genes that are involved in trafficking-related diseases into coherent pathogenetic pathways.
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    Regrettably, the wealth of new insights into the molecular defects in membrane-trafficking disorders has not yet led to a proportionate availability of effective therapies. However, in the past few years, the potential of mendelian diseases to drive the process of drug development has been recognized. An example in the field of membrane transport is cystic fibrosis. Effective modulators of the folding, trafficking, and activity of CFTR (the chloride channel that is mutated in cystic fibrosis) have been found through high-throughput screening that was aimed at identifying pharmacologic treatments for this disease. Some of these modulators (e.g., VX-809) are now being tested in clinical trials. In addition, interest in the pathways affected in mendelian disorders is being raised further by the recognition that efforts to develop drugs for their treatment might also prove useful in common diseases in which the same pathways might have a pathogenetic role, such as type 2 diabetes and Alzheimer’s disease.

    More than 50% of patients with hereditary spastic paraplegia carry mutations in one of three genes: spastin (SPG4), receptor-expression-enhancing protein 1 (SPG31 or REEP1), or atlastin-1 (SPG3A). Spastin encodes an ATPase with a microtubule-severing activity that has different splice variants with different subcellular localizations, including the endosomes and the endoplasmic reticulum. Notably, spastin interacts with the other hereditary spastic paraplegia protein, REEP1. REEP proteins, and the structurally related reticulon proteins, have a major morphogenetic role at the endoplasmic reticulum45 because of a conserved domain of approximately 200 amino acids with two hydrophobic segments that form a hairpin in the membrane and have membrane-bending properties. Through this domain and its ability to oligomerize, the REEP and reticulon proteins can shape membranes of the endoplasmic reticulum into tubules.45 Intriguingly, spastin also interacts with the third major hereditary spastic paraplegia protein, atlastin. These collective observations led to the hypothesis that atlastin itself might have a role in the morphogenesis of the endoplasmic reticulum. This disease-inspired hypothesis turned out to be correct and revealed that atlastin is involved in the generation of the tubular endoplasmic-reticulum network, since it mediates homotypic fusion of tubules in the endoplasmic reticulum. Finally, in a further tightening of the relationships among atlastin-1, spastin, and REEP1, these three proteins have recently been reported to interact with one another.
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    This emerging scenario supports a convergent mechanism of disease in the many forms of hereditary spastic paraplegia that involve a defect in the formation of the endoplasmic reticulum tubular network. This might be particularly detrimental for long spinal neurons, since the endoplasmic reticulum is a conduit for many important small molecules with signaling or structural roles (e.g., calcium and lipids). Thus, the pervasiveness and continuity of the endoplasmic-reticulum network might well be essential in these extremely elongated cells, whereas such a network may be at least partially dispensable in smaller cells.

    As in such examples, other cases can be identified in which information that is gathered from genetic diseases might reasonably lead to the discovery of converging molecular pathways in the near future. One such case is inherited renal Fanconi’s syndrome, a common clinical manifestation of a heterogeneous group of genetic disorders that are characterized by dysfunction of renal proximal tubular cells. These cells reabsorb more than 90% of nutrients, vitamins, and low-molecular-weight proteins present in the ultrafiltrate. This reabsorption of nutrients and proteins relies on efficient endocytic recycling of the multiligand receptor megalin, which captures its ligands in the ultrafiltrate, internalizes them through clathrin-dependent endocytosis, delivers them to the endolysosomes, and then recycles back to the apical surface of the cell for another round of transport. The endocytic system of these cells is subjected to a very heavy burden, and a drop in its efficiency can cause low-molecular-weight proteinuria, one of the hallmarks of renal Fanconi’s syndrome. Such a decline in efficiency might arise from defects in this endocytic receptor, megalin; in its associated receptor, cubilin; or in the machinery associated with their endocytosis and recycling. For instance, impaired trafficking of megalin has been suggested to occur in Dent’s disease, a proximal renal tubulopathy characterized by low-molecular-weight proteinuria, nephrocalcinosis, and hypercalciuria. This disease is caused by mutations in CLCN5, which encodes the renal chloride–proton antiporter, which in turn controls the acidification and recycling activity of endosomal compartments. Moreover, it has been shown that some forms of Dent’s disease (Dent 2) appear to also derive from mutations in OCRL1, which encodes an endosome-associated phosphatidylinositol 4,5-bisphosphate 5-phosphatase. OCRL1 was originally discovered as the causative gene in Lowe’s syndrome, a more serious disease that is characterized by proximal renal tubular dysfunction and by congenital cataracts and mental retardation.

    Other, more recent examples of this type of molecular lesson involve entire groups of mendelian disorders that share overlapping clinical phenotypes, even though they arise from mutations in different genes. These syndromes have highlighted the existence of complex molecular networks or pathways that include distinct but functionally converging genes. A paradigmatic example has come from a genetically heterogeneous group of inherited neurologic disorders that are characterized by progressive spasticity and weakness of the lower limbs. These disorders, which are caused by corticospinal motor neuron axonopathy, are the hereditary spastic paraplegias. They have autosomal dominant, recessive, and X-linked inheritance. To date, 20 genes have been identified, half of which are involved in membrane trafficking along the exocytic and endocytic pathways. The remainder are involved in mitochondrial functions, myelination, lipid metabolism, and DNA repair.

    More than 50% of patients with hereditary spastic paraplegia carry mutations in one of three genes: spastin (SPG4), receptor-expression-enhancing protein 1 (SPG31 or REEP1), or atlastin-1 (SPG3A). Spastin encodes an ATPase with a microtubule-severing activity that has different splice variants with different subcellular localizations, including the endosomes and the endoplasmic reticulum. Notably, spastin interacts with the other hereditary spastic paraplegia protein, REEP1. REEP proteins, and the structurally related reticulon proteins, have a major morphogenetic role at the endoplasmic reticulum45 because of a conserved domain of approximately 200 amino acids with two hydrophobic segments that form a hairpin in the membrane and have membrane-bending properties. Through this domain and its ability to oligomerize, the REEP and reticulon proteins can shape membranes of the endoplasmic reticulum into tubules. Intriguingly, spastin also interacts with the third major hereditary spastic paraplegia protein, atlastin. These collective observations led to the hypothesis that atlastin itself might have a role in the morphogenesis of the endoplasmic reticulum. This disease-inspired hypothesis turned out to be correct and revealed that atlastin is involved in the generation of the tubular endoplasmic-reticulum network, since it mediates homotypic fusion of tubules in the endoplasmic reticulum. Finally, in a further tightening of the relationships among atlastin-1, spastin, and REEP1, these three proteins have recently been reported to interact with one another.

    This emerging scenario supports a convergent mechanism of disease in the many forms of hereditary spastic paraplegia that involve a defect in the formation of the endoplasmic reticulum tubular network. This might be particularly detrimental for long spinal neurons, since the endoplasmic reticulum is a conduit for many important small molecules with signaling or structural roles (e.g., calcium and lipids). Thus, the pervasiveness and continuity of the endoplasmic-reticulum network might well be essential in these extremely elongated cells, whereas such a network may be at least partially dispensable in smaller cells.